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Chemical Drawing Atlas

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Schrödinger SketcherThis feature in other tools

MOL and SDF in Schrödinger Sketcher

Format menu lists MDL SD V3000.

Format menu lists MDL SD V3000.
What we checked
MOL files can be read and written; note if SDF is missing.
Result
Yes, tested by running it: Imported V2000 MOL and 3D SDF; exported V3000 MOL. Yes, tested by running it. Imported V2000 MOL and 3D SDF; exported V3000 MOL.
Version we tested
Release 2026-4 (build 131), on macOS 27.0.1 arm64
Manual
github.com

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